April 12

4/10 Lab Journal

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Purpose: Continue Individual Research

Procedure:

  • Searched for Phages containing an NMT in their genome to compare to the NMT found in NapoleonB and other AM cluster phages
  • Found three AU cluster phages for future research
  • Found three EG cluster phages with NMT genes
  • Added all the fasta files for the NMT genes from the new phages, AM cluster, and bacteria to a splitstree diagram
  • Fought splitstree for almost a half hour to get it to work
  • Eventually manipulated the program to do its job
  • Found that with the present data we couldn’t put together a map to truly represent the genealogy of the gene

Results: Found that the splitstree graph will be harder to create than previously imagined. Will need more samples.

Future Plans: Continue finding more NMT fasta files to make into a coherent phylogenetic tree


Posted April 12, 2019 by Shepard Saabye in category Uncategorized

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