January
25
Elesar Auto Annotation 1/23/19
Rationale:
The purpose was to learn about the features of DNA Master specifically about open reading frames using Elesar.
Tools/Procedure:
- DNA Master was opened and the code, accessed through file then preference then local settings then new feature, was changed to “SSC: CP: SCS: ST: BLAST-Start: Gap: LO: RBS: F: SIF-BLAST: SIF-HHPred: SIF-Syn”.
- Elesar was added to DNA Master and Auto Annotated.
- The ORF’s of Elesar were observed.
Results:
Auto Annotation of Elesar using a Fasta File was obtained using DNA Master. Reverse ORF’s represented by the highlighted portions were viewed.
Conclusion:
More features of DNA Master were learnt specifically about ORF’s. Concepts such as reading frames, gaps and overlaps were learnt as well.
Future Work:
To acquire more knowledge about DNA Master’s features and understand the data presented for Elesar which will aid when annotating NapoleanB.