Soil Washing 09.24.18
Rationale)
To collect another soil sample and wash it, creating an enriched isolation that can be used to potentially isolate a phage. I will also collect metadata in regards to the soil sample I collected.
Results from Friday)
The results of the plaque assay were negative and the top agar control showed bacterial growth indicating contamination.
Procedures)
- Setup an aseptic zone
- Collected Soil D in a bag labeled “NMN 9.24.18 Soil D”
- Added 2mL of Soil D to a 15mL vial labeled “NMN Soil D+ 9.24.18”
- Added 10mL of LB broth to the vial, shook for 10 minutes. Took the mass.
- Centrifuged for 10 minutes
- Used a .22 micron syringe filter to filter the supernatant into a 50mL conical vial labeled “NMN 9.24.18 Soil D Enriched Lysate”, filtered .5mL into a micro test tube labeled “NMN 09.24.18 FDL”
- Added .5mL of arthro to the “Enriched” vial
- Placed the “Enriched” vial onto the shaker table for 48 hours.
- Refrigerated the “FDL” tube for 48 hours.
- Stored the bag with Soil D in the walk-in refrigerator.
Observations/Data)
The mass of the tube “NMN Soil D+ 9.24.18” was 18.336g. My plaque assay was negative with no plaques being formed and our top agar control showed bacterial colonies growing throughout. Once I stopped shaking my soil sample, sand began to settle out immediately.
Conclusions/Next Steps)
The next step will be to conduct a plaque assay and a spot test with the lysates produced from Soil D in the effort to isolate a phage from Soil D, in addition to collecting metadata on Soil D.