April 11

Preparing for SEA-PHAGES Symposium (4/10/19)

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Rationale:

Analyze endolysins and holins to collect more data to create a presentation to present at SEA-PHAGES symposium.

Procedure:

  1. Printed out and analyzed RaptorX structures created previously.
  2. Outlined SEA-PHAGES symposium presentation.
  3. Used Blender to model holin’s hole formation.

Results:

The following images shows the endolysins and holins structure predicted with RaptorX.

The following image shows the unfinished holin creating holes in the plasma membrane model.

Conclusion:

Compared with Multiple Sequence Alignment and phylogenetic tree results, the predicted protein structure visualized with RaptorX revealed that there are although sequences were quite similar, the structures varied.

Future Work:

Finish creating presentation and present poster and presentation at SEA-PHAGES symposium.


Posted April 11, 2019 by Kathryn Adkins in category Kathryn Adkins

About the Author

Kathryn Adkins is currently a freshman attending Baylor University majoring in neuroscience with a minor in biochemistry.  She hopes to one day earn an M.D./Ph.D. and become a pediatric oncologist and cancer researcher. Kathryn volunteers at Cook Children’s Hospital in Fort Worth and is actively involved in AMSA (American Medical Student Association) and BURST (Baylor University Research in Science and Technology).

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