February 22

NapoleonB Annotations

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2/20/19

Rational:

To check the annotations of NapoleonB in order to fix possible errors.

Procedure:

  • Looked for gaps and overlaps that could indicate a mistake
  • Rechecked GeneMark using the correct host
  • Checked the coding potential for genes 9-12 and 98
  • Checked the SCS for the genes

Observations:

  • The host that was originally used for GeneMark was inncorrect which gave incorrect information for coding potential
  • The answer for SCS was also changed for a few of the genes
  • The answers for coding potential did not change

Fig.5 – This image shows that the GeneMark results show coding potential for gene 10, but not a gene

Conclusion:

The errors that were found in the assigned genes as well as the rest of the genes were fixed. Next lab we will work on the poster for the lab.


Posted February 22, 2019 by emily_balint1 in category Emily Balint

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