Rationale: Annotated genes 6 and 7 of elesar

1. Gene 6
   SSC: 3685-4974
   CP: yes
   SCS: both
   ST: NA BLAST-Start: matches with Nandita, 7, phagesdb, q1:s1, 97%, 0.0
   Gap: 16
   LO: yes
   RBS: Kibler7, Karlin Medium, 3.215, -2.059, yes
   F: portal protein SIF-BLAST: portal protein, phagesdb, Nandita_7, MH834621, 97%, 0.0
   SIF-HHPred:
   SIF-Syn

2. Gene 7
   SSC: 5025-6221
   CP: yes
   SCS: neither
   ST: NA
   BLAST-Start: matches with Nandita, 8, phagesdb, q1:s14, 93%, 0.0
   Gap: 50
   LO: no
   RBS: Kibler7, Karlin Medium, 1.823, -6.049, no
   F: capsid maturation protease
   SIF-BLAST: capsid maturation protease, phagesdb, Nandita_8, MH834621, 93%, 0.0
   SIF-HHPred:
   SIF-Syn

Results/Conclusion:

Annotated 2 genes. Gene 6 I determined to be an RBS because it had the best values for Z score and F score. I changed the starting codon on gene 7 based on the ORF map suggested value and concluded that it was not an RBS.

Future Steps: Figure out if my annotations were correct and figure out how to successfully use template notes.