January 27

Beginning Auto-Annotation of Phage Elesar

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Shepard Saabye

January 23rd, 2019

 

Purpose and Rationale: Begin learning the basics of DNA Master by annotating Phage Elesar.

Procedure:

  • Implemented a new code to replace an outdated procedure inside the local settings screen.

 

  • Reloaded Elesar and DNA Master, and initialized auto-annotation.
  • Opened frames, and found all open reading frames within the genome.

  • Due to complications with computers, this was as far as the class got during lab time. Proceded to clos programs, and followed instructions for QTM.

Results: The genetic makeup of Phage Elesar contains 66 potential genes, of which only 11 are reverse genes. The genome is nearly 43 thousand base pairs long.

Future Steps: The auto-annotated genome of Elesar is ready to be analyzed BLASTed in a separate program based on an online platform, from Genemark. With that, we will be able to potentially find the lineage, and functions of the genes.


Posted January 27, 2019 by Shepard Saabye in category Uncategorized

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