January
17
Auto Annotation and DNA master installation
1/16/19
Rationale:
To install and use DNA master to auto annotate and analyse the genome of phage elesar.
Tools Used:
- Personal Laptop
- DNA master
Procedure:
- DNA master was downloaded and installed onto personal laptop.
- The following steps were followed to go to local settings, File > Preferences> Local settings> Directories
- Archive file settings were changed to a location where it would be easier to find
- The color settings for tRNA, tmRNA and ORF are changed and all the changes are applied
- the elesar genome file was opened in DNA master using the following, File>Open>FastA multiple sequence file
- the following steps were followed, Export> Create sequence from this entry only>Genome>Auto Annotate
- this is where the day ended.
Observations:
The operation of DNA master is difficult and will take a great deal of practice. Elesar has 66 genes, of which one was tRNA and the rest are ORF genes.
Results:
successful auto annotation was performed on the genome sequence. ORFs on the gene sequence were marked as shown above.
Conclusions and Future Steps:
Currently, no conclusions can be drawn from this data due to the lack of the knowledge to do so. more practice and augmentation is required to better work with this software.