Making Webbed Plates and Setting up for TEM 11/19/18
Rationale: Since I need at least 12.8mL of lysate for DNA extraction and archiving I need to make some webbed plates to flood. I calculated that I need 8µL of lysate diluted to the 10^-5 to web a plate, so I will plate three plates with that amount.
Procedure:
- Put parafilm on a plate and pipetted 15µL of lysate onto the parafilm.
- Pipetted 20µL of water twice onto the parafilm.
- A TA aliquotted uracyl acetate onto the parafilm
- Placed a TEM stage from section A10 onto the lysate and let sit for 5 minutes.
- Transferred stage to water and let sit for 2.5 minutes.
- Repeated for the second drop of water.
- Transferred stage to uracyl acetate for 1 minute then took off and placed back into container on the side to be used for TEM.
- Pipetted 8µL of 10^-5 lysate into 0.5mL of arthrobacter 3 times and let sit for 30 minutes.
- Made top agar with 8mL of LB broth, 90µL of CaCl2, and 10 mL of 2X TA.
- Plated control with 4.5mL of solution.
- Aliquot 4.5mL of solution into each tube of enriched lysate and arthrobacter.
- Mixed by pipetting up and down then plated each.
- After letting solidify inverted and placed into incubator for 24 hours.
Observations:
The plate wasn’t fully lysed because the plaque morphology isn’t uniform. I placed back in the incubator over break in hopes of getting a slightly more webbed plate.
Conclusions and Next Steps: This means that there is more than one type of phage in my lysate. However, I do not have time to run another round of purification. This means that I will just have to keep running with my current lysate and acknowledge that there are two phages in my lysate when I extract DNA. From there I can differentiate between the two phages.