November 8

Titer Calculations and Webbing a Plate (11/7/18)

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Results:

No contamination, however, the “KEA 11/5 PA 10-2” plate looked strange since it folded up when solidifying.

Rationale:

The titer will be calculated from the “KEA 11/5 PA 10-1” plate. From this, the amount of lysate needed to webbed the plate will be calculated. Three plaque assays will be run with slightly varying amounts to increase the likelihood of receiving a webbed plate.

Procedure:

  1. Counted the total number of plaques on “KEA 11/5 PA 10-1” plate.
  2. Calculated the average diameter of plaques, the titer, and the amount of lysate needed to web the plate.
  3. Once an aseptic zone was established, 97 µL, 125 µL, and 150 µL of “KEA 11/5 FS lysate 100” were added to correlated test tubes which already contained 0.5 mL of Arthrobacter.
  4. 8 mL of LB Broth, 90 µL of CaCl2, and 10 mL of 2X TA were combined into a conical vial.
  5. Transferred and mixed 4.5 mL of the Top Agar (TA) mixture from the conical vial into each test tube.
  6. Each test tube was poured onto their correlating plate, and the remaining 4.5 mL of the TA mixture was poured onto a plate labeled “KEA 11/7 Control.”
  7. These plates were placed in the incubator at room temperature.

Observations:

  • 132 plaques were counted from the “KEA 11/5 PA 10-1” plate. The following photos show the plates from previously.

  • The following measurements were recorded from 10 random plaques to approximate the average diameter: 0.3, 0.3, 0.5, 0.6, 0.5, 0.6, 0.2, 0.2, 0.3, and 0.3 mm. The average diameter calculated was 0.38 mm.
  • The approximate plaque diameter from the “KEA 11/5 PA 10-1” plate were slightly less than half the size of the approximate plaque diameter from the “KEA 10/29 100PA” plate.

Calculations:

  • After the plaque assays had been performed, it was noticed that the webbed calculations were done using the plaque diameter instead of the radius. The following shows the correct calculations.

  • The following calculations were performed to determine enough LB Broth, 2X TA, and CaCl2needed for 4 plates.

    Original Recipe

    X4

    2 mL LB Broth

    8 mL LB Broth
    2.5 mL 2X TA

    10 mL 2X TA

    22.5 μL CaCl2

    90 μL CaCl2

    Next Steps:

    In open lab, plaque assays will be performed with the correct amount of lysate.


Posted November 8, 2018 by Kathryn Adkins in category Kathryn Adkins

About the Author

Kathryn Adkins is currently a freshman attending Baylor University majoring in neuroscience with a minor in biochemistry.  She hopes to one day earn an M.D./Ph.D. and become a pediatric oncologist and cancer researcher. Kathryn volunteers at Cook Children’s Hospital in Fort Worth and is actively involved in AMSA (American Medical Student Association) and BURST (Baylor University Research in Science and Technology).

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