PA Results and Second Passage PA (10/24/18)
Results:
Many plaques formed on the “KEA 10/22 100-1 PA” plate. The “KEA 10/22 100-0 PA” plate was contaminated. One small plaque appeared on “KEA 10/22 100-2” plate. The shared control plate was contaminated. The pictures below show these plates.
Rationale:
To continue the purification process, a plaque will be chosen from the “KEA 10/22 100-1 PA” plate. Two plaque assays will be performed with this chosen plaque, with one using 100and the other 10-1.
Procedure:
- Once an aseptic zone was established, 100 µL of phage buffer was placed into microcentrifuge tube “KEA 10/24 100.”
- Used a micropipette tip to touch a plaque from the “KEA 10/22 100-1 PA” plate and then swirled the tip in the “KEA 10/24 100” microcentrifuge tube.
- The “KEA 10/24 100” microcentrifuge tube was vortexed.
- 10 µL of “KEA 10/24 100” was added with 90 µL of phage buffer to create 10-1dilution which was then vortexed.
- 10 µL of 100and 10-1were added to correlated test tubes which already had 0.5 mL of Arthrobacter in them.
- 6 mL of LB Broth, 67.5 µL of CaCl2, and 7.5 mL of 2X TA were combined into a conical vial.
- Transferred and mixed 4.5 mL of the TA mixture from the conical vial into each test tube.
- Each test tube was poured onto their correlating plate.
- These plates were placed in the incubator at room temperature.
Observations:
- The following calculations were performed to determine the amount of LB Broth, 2X TA, and CaCl2needed for 3 plates.
Original Recipe |
X3 |
2 mL LB Broth |
6 mL LB Broth |
2.5 mL 2X TA |
7.5 mL 2X TA |
22.5 μL CaCl2 |
67.5 μL CaCl2 |
- The plaque circled bellowed was picked to make “KEA 10/24 100” plaque, phage buffer mixture. The plaques on this plate were not as distinct as the plaques found on the “KEA 10/12/18 Soil E PA” plate.
- Air bubbles formed when pouring the “KEA 10/24 10-1PA” plate.
- Strange contamination spots formed on the shared control plate as shown below.
Next Steps:
If there is contamination, a plaque assay will be run again with the same dilutions. If there are plaques, a third passage will be performed. If there are no plaques, a different plaque will be chosen.