October 15

Results from PA of Soil E, Metadata, and Serial Dilutions (10/15/18)

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Results:

From the plaque assay ran on Friday (10/12), 4 plaques were found as shown below.

Rationale:

Since plaques did appear, soil metadata will be collected for future correlations. Also, a plaque will be picked and serial dilutions will be made to be ready to plate to start the quest to find a high titer.

Procedure:

  1. Once an aseptic zone was established, about 3 grams of soil E was poured out into a weigh boat labeled “KEA 10/15 soil E” and left under the flume hood to dry out.
  2. A falcon tube labeled “KEA 10/15 soil E” was filled with 10 mL of soil E, 20 mL of de-ionized (DI) water, and three drops of texture dispersion liquid.
  3. The “KEA 10/15 soil E” falcon tube was shaken for 30 seconds and then left under the flume hood for the next 48 hours.
  4. A small amount of soil E was placed in a pH vial and the rest was filled with DI water.
  5. The pH vial was shaken for 10 seconds and then settled for 2 minutes.
  6. Used pH paper to determine the pH of the soil.
  7. 100 µL of phage buffer was placed into a microcentrifuge tube labeled “KEA 10/15 100.”
  8. Used a micropipette tip to touch the plaque and then swirled the tip in the “KEA 10/15 100” microcentrifuge tube.
  9. The “KEA 10/15 100” microcentrifuge tube was vortexed.
  10. 10 µL of “KEA 10/15 100” was added with 90 µL of phage buffer to create 10-1
  11. 10 µL of “KEA 10/15 10-1” was added with 90 µL of phage buffer to create 10-2

Observations:

  • The 4 plaques found on the “KEA 10/12/18 PA Soil E” plate were small and distinct.
  • The weigh boat weighed 2.39 grams. The weigh boat with wet soil weighed 6.15 grams.
  • The pH of the soil was determined to be 6.0 as shown in the picture below.

  • Dilutions were created all the way out to 10-7.

Next Steps:

On Wednesday, the dilutions will be plated.


Posted October 15, 2018 by Kathryn Adkins in category Kathryn Adkins

About the Author

Kathryn Adkins is currently a freshman attending Baylor University majoring in neuroscience with a minor in biochemistry.  She hopes to one day earn an M.D./Ph.D. and become a pediatric oncologist and cancer researcher. Kathryn volunteers at Cook Children’s Hospital in Fort Worth and is actively involved in AMSA (American Medical Student Association) and BURST (Baylor University Research in Science and Technology).

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